@article {4477, title = {Des essais de code-barres ADN sur les mouches africaines des fruits. La lutte r{\'e}gionale contre les mouches des fruits en Afrique subsaharienne [also in English version]}, volume = {2}, year = {2010}, pages = {2}, author = {DE MEYER, M.} } @article {4477, title = {Jelent{\H o}sebb hazai vadpontyfajt{\'a}ink genetikai v{\'a}ltozatoss{\'a}g{\'a}nak fenntart{\'a}sa a HAKI ex situ g{\'e}nbankj{\'a}nak, valamint a faj term{\'e}szetes vizeinkben {\'e}l{\H o} popul{\'a}ci{\'o}inak seg{\'\i}ts{\'e}g{\'e}vel. [Maintenance of the genetic variability of the most important Hungarian wild carp}, volume = {103}, year = {2010}, pages = {104 - 109}, author = {Lehoczky, I. and Nagy, Z.T. and Bakos, J. and Jeney, Z.} } @inbook {53, title = {Relict populations and endemic clades in Palearctic reptiles: Evolutionary history and implications for conservation}, booktitle = {Les reptiles du Gabon}, year = {2010}, pages = {149 - 152}, publisher = {Smithsonian Institute}, organization = {Smithsonian Institute}, issn = {978-1-893912-01-4}, author = {Joger, Ulrich and Fritz, Uwe and Guicking, D. and Kalyabina-Hauf, S. and Nagy, Zolt{\'a}n T. and Wink, Michael and Habel, J.C. and Assmann, T.} } @article {4352, title = {A rhapsody of colours from Madagascar: discovery of a remarkable new snake of the genus Liophidium and its phylogenetic relationships}, journal = {Salamandra}, volume = {46}, year = {2010}, pages = {1 - 10}, type = {no impact factor}, keywords = {archival DNA, Aves, COI, Democratic Republic of the Congo, DNA barcoding, museum sample}, url = {http://www.nhbs.com/bonner_zoologische_monographien_tefno_5027.html}, author = {Vieites, David R and Ratsoavina, F.M. and Randrianiaina, R-D. and Nagy, Zolt{\'a}n T. and Glaw, Frank and Vences, Miguel} } @article {4352, title = {Do birds from the Democratic Republic of Congo present in museum collections contain useful genetic information?}, journal = {Entomologica Romanica}, volume = {15}, year = {2010}, pages = {11 - 16}, type = {no impact factor}, keywords = {archival DNA, Aves, COI, Democratic Republic of the Congo, DNA barcoding, museum sample}, url = {http://www.nhbs.com/bonner_zoologische_monographien_tefno_5027.html}, author = {Sonet, Gontran and Breman, Floris C and Jordaens, Kurt and Lenglet, Georges and Louette, Michel and Montanes, Gloria and Nagy, Zolt{\'a}n T. and Van Houdt, Jeroen K.J. and Verheyen, Erik} } @article {4352, title = {Preliminary molecular systematics of the African Goshawk Accipiter tachiro (Daudin, 1800)}, journal = {A{\c c}oreana Suplemento}, volume = {7}, year = {2010}, pages = {241 - 291}, type = {no impact factor}, keywords = {archival DNA, Aves, COI, Democratic Republic of the Congo, DNA barcoding, museum sample}, url = {http://www.nhbs.com/bonner_zoologische_monographien_tefno_5027.html}, author = {Breman, Floris C and Jordaens, Kurt and Sonet, Gontran and Van Houdt, Jeroen K.J. and Nagy, Zoltan T and Louette, Michel} } @article {4464, title = {Molecular genetic structure and relationship of Chinese and Hungarian common carp (Cyprinus carpio L.) strains based on mitochondrial sequence}, journal = {Aquaculture Research}, volume = {41}, year = {2010}, month = {Jan-08-2010}, pages = {1339 - 1347}, doi = {10.1111/are.2010.41.issue-910.1111/j.1365-2109.2009.02422.x}, author = {Wang, Chenghui and Li, Sifa and Nagy, Zolt{\'a}n Tam{\'a}s and Lehoczky, I and Huang, Len and Zhao, Yan and Song, Xiao and Jeney, Zsigmond} } @article {4458, title = {Macrogeographic population structuring in the cosmopolitan agricultural pest Bactrocera cucurbitae (Diptera: Tephritidae)}, journal = {Molecular Ecology}, volume = {19}, year = {2010}, month = {Jan-07-2010}, pages = {2713 - 2724}, doi = {10.1111/mec.2010.19.issue-1310.1111/j.1365-294X.2010.04662.x}, author = {Virgilio, Massimiliano and DELATTE, H. and Backeljau, Thierry and De Meyer, Marc} } @article {4456, title = {Influence of flooding and metal immobilising soil amendments on availability of metals for willows and earthworms in calcareous dredged sediment-derived soils}, journal = {Environmental Pollution}, volume = {158}, year = {2010}, month = {Jan-06-2010}, pages = {2181 - 2188}, issn = {02697491}, doi = {10.1016/j.envpol.2010.02.017}, author = {Vandecasteele, Bart and Du Laing, Gijs and Lettens, Suzanna and Jordaens, Kurt and Tack, Filip M.G.} } @article {4453, title = {Fire as a selective force in a Bornean tropical everwet forest}, journal = {Oecologia}, volume = {164}, year = {2010}, month = {Jan-11-2010}, pages = {841 - 849}, issn = {0029-8549}, doi = {10.1007/s00442-010-1764-4}, author = {Slik, J. W. Ferry and Breman, Floris C. and Bernard, Caroline and Van Beek, Marloes and Cannon, Charles H. and Eichhorn, Karl A. O. and Sidiyasa, Kade} } @article {4447, title = {Systematics of the snake genera Stenophis and Lycodryas from Madagascar and the Comoros}, journal = {Zoologica Scripta}, volume = {39}, year = {2010}, month = {Jan-09-2010}, pages = {426 - 435}, doi = {10.1111/zsc.2010.39.issue-510.1111/j.1463-6409.2010.00435.x}, author = {Nagy, Zolt{\'a}n T. and Glaw, Frank and Vences, Miguel} } @article {4445, title = {Phylogeography of the Caspian whipsnake in Europe with emphasis on the westernmost populations}, journal = {Amphibia-Reptilia}, volume = {31}, year = {2010}, month = {Jan-11-2010}, pages = {455 - 461}, issn = {0173-5373}, doi = {10.1163/017353710X518397}, author = {Nagy, Zolt{\'a}n T. and Bellaagh, M{\'a}ty{\'a}s and Wink, Michael and Paunovic, Ana and Kors{\'o}s, Zolt{\'a}n} } @article {4441, title = {High molecular diversity in the rhodopsin gene in closely related goby fishes: A role for visual pigments in adaptive speciation?}, journal = {Molecular Phylogenetics and Evolution}, volume = {55}, year = {2010}, month = {Jan-05-2010}, pages = {689 - 698}, issn = {10557903}, doi = {10.1016/j.ympev.2009.10.007}, author = {Larmuseau, Maarten H.D. and Huyse, Tine and Vancampenhout, Kim and Van Houdt, Jeroen K.J. and Volckaert, Filip A.M.} } @article {4439, title = {Fifteen microsatellite loci for the decollate snail, Rumina decollata}, journal = {Conservation Genetics Resources}, volume = {2}, year = {2010}, pages = {287-289}, keywords = {Land snail, Microsatellite, PCR primers, Rumina, SSR, STR}, issn = {1877-7252}, doi = {10.1007/s12686-010-9193-6}, url = {http://dx.doi.org/10.1007/s12686-010-9193-6}, author = {Lance, Stacey L and Jones, Kenneth L and Hagen, Cris and Jordaens, Kurt and Backeljau, Thierry and Pr{\'e}vot, Vanya} } @article {4435, title = {Arion transsylvanus (Mollusca, Pulmonata, Arionidae): rediscovery of a cryptic species}, journal = {Zoologica Scripta}, volume = {39}, year = {2010}, month = {Jan-07-2010}, pages = {343 - 362}, doi = {10.1111/zsc.2010.39.issue-410.1111/j.1463-6409.2010.00425.x}, author = {Jordaens, Kurt and Pinceel, Jan and Van Houtte, Natalie and Breugelmans, Karin and Backeljau, Thierry} } @article {4430, title = {Did historical events shape current geographic variation in morph frequencies of a polymorphic damselfly?}, journal = {Journal of Zoology}, volume = {282}, year = {2010}, month = {Jan-12-2010}, pages = {256 - 265}, doi = {10.1111/jzo.2010.282.issue-410.1111/j.1469-7998.2010.00735.x}, author = {Iserbyt, A. and Bots, J. and Van Gossum, H. and Jordaens, K.} } @article {4428, title = {Genetic divergence among sympatric colour morphs of the Dalmatian wall lizard (Podarcis melisellensis)}, journal = {Genetica}, volume = {138}, year = {2010}, pages = {387 - 393}, issn = {1755098X}, doi = {10.1111/men.2009.9.issue-110.1111/j.1755-0998.2008.02381.x}, author = {Huyghe, K. and Small, M. and Vanhooydonck, B. and Herrel, A. and Tadic, Z. and Van Damme, R. and Backeljau, T.} } @article {4402, title = {Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2009-31 January 2010}, journal = {Molecular Ecology Resources}, volume = {10}, year = {2010}, month = {05/2010}, pages = {576 - 579}, issn = {17550998}, doi = {10.1111/j.1755-0998.2010.02851.x}, author = {ANDERSON, CYNTHIA M. and APARICIO, GALLEGO J. and ATANGANA, ALAIN R. and BEAULIEU, JEAN and BRUFORD, M.W. and CAIN, FORREST and CAMPOS, T. and CARIANI, A. and CARVALHO, M.A. and CHEN, NAN and CHEN, P.P. and CLAMENS, A.-L. and CLARK, ANN M. and COEUR D{\textquoteright}ACIER, A. and CONNOLLY, PAUL and CORDERO-RIVERA, ADOLFO and COUGHLAN, JAMES P. and CROSS, THOMAS S. and DAVID, BRUNO and DE BRUYN, COLIN and DE MEYER, M. and DE RIDDER, CHANTAL and DELATTE, H. and DETTORI, M.T. and DOWNER, S.J. and DUBREUIL, CHRISTINE and EVANS, K.J. and FAN, BIN and FERRARA, G. and GAGN{\'E}, ANDR{\'E} and GAILLARD, MARIA and GIGLIARELLI, L. and GIOVINAZZI, J. and GOMEZ, D.R. and GR{\"U}NWALD, N.J. and HANSSON, BENGT and HUOTARI, T. and JANK, L. and JOUSSELIN, E. and JUNGMANN, L. and KACZMAREK, M.E. and KHASA, DAMASE P. and KNEEBONE, JEFF and KORPELAINEN, H. and KOSTAMO, K. and LANFALONI, L. and LIN, HAORAN and LIU, XIAOCHUN and LUCENTINI, L. and MAES, G.E. and MAHAFFEE, W.F. and MENG, ZINING and MICALI, S. and MILANO, I. and MOK, H.F. and MORIN, L. and NEILL, T.M. and NEWTON, CRAIG H. and GIGI OSTROW, D. and PALOMBA, A. and PANARA, F. and PULETTI, M.E. and QUARTA, R. and QUILICI, S. and RAMOS, A.K.B. and RIGAUD, THIERRY and RISTERUCCI, A.M. and SALOMON, MATTHEW P. and S{\'A}NCHEZ-GUILL{\'E}N, ROSA A. and SARVER, SHANE K. and SEQUEIRA, A.S. and SFOR{\c C}A, D.A. and SIMIAND, C. and SMITH, BRIAN and SOUSA, A.C.B. and SOUZA, A.P. and STEPIEN, C.C. and STUCKERT, A.J. and SULIKOWSKI, JAMES and TAYEH, A. and TINTI, F. and TSANG, PAUL C.W. and VAN HOUDT, J. K. J. and VENDRAMIN, E. and VERDE, I. and VIRGILIO, M. and WANG, HUAN L. and WANG, LE and WATTIER, R{\'E}MI A. and WELLENREUTHER, MAREN and XIE, CONG X. and ZANE, L. and ZHANG, XIU J. and ZHANG, YONG and ZHUANG, ZHIMENG and ZUCCHI, M.I.} } @article {4394, title = {Effects of body size on courtship role, mating frequency and sperm transfer in the land snail Succinea putris}, journal = {Animal Behaviour}, volume = {79}, year = {2010}, month = {5/2010}, pages = {1125 - 1133}, issn = {00033472}, doi = {10.1016/j.anbehav.2010.02.010}, author = {Dillen, Lobke and Jordaens, Kurt and van Dongen, Stefan and Backeljau, Thierry} } @article {4393, title = {Fecundity in the hermaphroditic land snail Succinea putris (Pulmonata: Succineidae): does body size matter?}, journal = {Journal of Molluscan Studies}, volume = {76}, year = {2010}, month = {11/2010}, pages = {376 - 383}, issn = {1464-3766}, doi = {10.1093/mollus/eyq026}, author = {Dillen, L. and Jordaens, K. and De Bruyn, L. and Backeljau, T.} } @article {4388, title = {A hands-on overview of tissue preservation methods for molecular genetic analyses}, journal = {Organisms Diversity \& Evolution}, volume = {10}, year = {2010}, month = {3/2010}, pages = {91 - 105}, issn = {1618-1077}, doi = {10.1007/s13127-010-0012-4}, author = {Nagy, Zolt{\'a}n Tam{\'a}s} } @article {4386, title = {Comparative performances of DNA barcoding across insect orders}, journal = {BMC Bioinformatics}, volume = {11}, year = {2010}, month = {2010}, pages = {206}, issn = {1471-2105}, doi = {10.1186/1471-2105-11-206}, author = {Virgilio, Massimiliano and Backeljau, Thierry and Nevado, Bruno and De Meyer, Marc} } @article {4379, title = {DNA barcoding of museum specimens of Lymantriidae preserved in the Royal Museum for Central Africa}, journal = {Entomologica romanica}, volume = {15}, year = {2010}, pages = {11-16}, abstract = {Some preserved specimens of the lepidopteran collection of the Royal Museum for Central Africa were used in a pilot DNA barcoding study. They differed in age, the applied preservation methods and collection sites. Thereby, short and standard DNA barcode sequences were obtained, and species assignments based on neighbour-joining tree reconstruction were carried out and compared with morphological identification. Our results show that the DNA barcoding approach is able to distinguish lymantriid species on an efficient way. Furthermore, we show three examples where it also provides with novel information to taxonomic problems: we found a possibly undescribed species of Leucoma, recovered the possible synonymy of Stracena promelaena and Stracena flavescens, and found an unexpected genetic diversity of some Porthesaroa species.}, keywords = {Afrotropic, COI, DNA barcoding, Lymantriidae}, issn = {1224-2594}, author = {Nagy, Zolt{\'a}n T. and Breman, Floris C and Dall Asta, Ugo} } @article {4372, title = {Exploring the Use of Cytochrome Oxidase c Subunit 1 (COI) for DNA Barcoding of Free-Living Marine Nematodes}, journal = {PLoS ONE}, volume = {5}, year = {2010}, month = {10/2010}, pages = {e13716}, abstract = {Background The identification of free-living marine nematodes is difficult because of the paucity of easily scorable diagnostic morphological characters. Consequently, molecular identification tools could solve this problem. Unfortunately, hitherto most of these tools relied on 18S rDNA and 28S rDNA sequences, which often lack sufficient resolution at the species level. In contrast, only a few mitochondrial COI data are available for free-living marine nematodes. Therefore, we investigate the amplification and sequencing success of two partitions of the COI gene, the M1-M6 barcoding region and the I3-M11 partition. Methodology Both partitions were analysed in 41 nematode species from a wide phylogenetic range. The taxon specific primers for the I3-M11 partition outperformed the universal M1-M6 primers in terms of amplification success (87.8\% vs. 65.8\%, respectively) and produced a higher number of bidirectional COI sequences (65.8\% vs 39.0\%, respectively). A threshold value of 5\% K2P genetic divergence marked a clear DNA barcoding gap separating intra- and interspecific distances: 99.3\% of all interspecific comparisons were >0.05, while 99.5\% of all intraspecific comparisons were <0.05 K2P distance. Conclusion The I3-M11 partition reliably identifies a wide range of marine nematodes, and our data show the need for a strict scrutiny of the obtained sequences, since contamination, nuclear pseudogenes and endosymbionts may confuse nematode species identification by COI sequences.}, doi = {10.1371/journal.pone.0013716.t002}, url = {http://jemu.myspecies.info/sites/jemu.myspecies.info/files/journal.pone_.0013716-1.pdf}, author = {Derycke, Sofie and Vanaverbeke, Jan and Rigaux, Annelien and Backeljau, Thierry and Moens, Tom} } @article {4359, title = {Discovery of a new duiker species (Bovidae: Cephalophinae) from the Dahomey Gap, West Africa}, journal = {Zootaxa}, volume = {2637}, year = {2010}, pages = {1{\textendash}30}, keywords = {bushmeat, craniometry, mitochondrial DNA, new duiker species, nuclear DNA, Philantomba walteri sp. nov.}, url = {http://www.mapress.com/zootaxa/2010/f/z02637p030f.pdf}, author = {Colyn, Marc and Hulselmans, Jan and Sonet, Gontran and Oud{\'e}, Pascal and De Winter, Jan and Natta, Armand and Nagy, Zolt{\'a}n T. and Verheyen, Erik} } @article {4357, title = {A molecular diagnostic for identifying central African forest artiodactyls from faecal pellets}, journal = {Animal Conservation}, volume = {13}, year = {2010}, month = {01/2010}, pages = {80 - 93}, keywords = {artiodactyl, barcoding, central Africa, control region, cytochrome b, duiker, RFLP, species diagnostic}, issn = {14691795}, doi = {10.1111/j.1469-1795.2009.00303.x}, author = {Ntie, S. and Johnston, A. R. and Mickala, P. and Bowkett, A. E. and Jansen van Vuuren, B. and Colyn, M. and Telfer, P. and Maisels, F. and Hymas, O. and Rouyer, R. L. and Wallace, R. A. and LeBlanc, K. and van Vliet, N. and Sonet, G. and Verheyen, E. and Pires, D. and Wickings, E. J. and Lahm, S. A. and Anthony, N. M.} } @article {4356, title = {Towards a revision of the Neotropical soldierless termites (Isoptera : Termitidae): redescription of the genus Anoplotermes and description of Longustitermes, gen. nov.}, journal = {Invertebrate Systematics}, volume = {24}, year = {2010}, pages = {357 - 370}, keywords = {Molecular phylogeny, new species, taxonomy}, doi = {10.1071/IS10012}, url = {http://www.publish.csiro.au/paper/IS10012.htm}, author = {Bourguignon, Thomas and Scheffrahn, Rudolf H and K{\v r}e{\v c}ek, Jan and Nagy, Zolt{\'a}n T. and Sonet, Gontran and Roisin, Yves} } @article {4355, title = {Recovering full DNA barcodes from natural history collections of Tephritid fruitflies (Tephritidae, Diptera) using mini barcodes}, journal = {Molecular Ecology Resources}, volume = {10}, year = {2010}, month = {05/2010}, pages = {459 - 465}, keywords = {Bactrocera, Ceratitis, COX1, Dacus, mtDNA, museum}, issn = {17550998}, doi = {10.1111/j.1755-0998.2009.02800.x}, author = {VAN HOUDT, J. K. J. and BREMAN, F. C. and VIRGILIO, M. and DE MEYER, M.} } @article {4351, title = {Incongruence between molecular phylogeny and morphological classification in amphipod crustaceans: A case study of Antarctic lysianassoids}, journal = {Molecular Phylogenetics and Evolution}, volume = {55}, year = {2010}, month = {04/2010}, pages = {202 - 209}, keywords = {28S rRNA, Amphipoda, COI, Lysianassoidea, Molecular phylogeny, Southern Ocean}, issn = {10557903}, doi = {10.1016/j.ympev.2009.10.025}, author = {Havermans, Charlotte and Nagy, Zolt{\'a}n T. and Sonet, Gontran and De Broyer, Claude and Martin, Patrick} }