TY - JOUR T1 - Description of new Ceratitis species (Diptera: Tephritidae) from Africa, or how morphological and DNA data are complementary in discovering unknown species and matching sexes JF - European Journal of Taxonomy Y1 - 2016 DO - 10.5852/ejt.2016.233 A1 - De Meyer, Marc A1 - Mwatawala, Maulid A1 - Copeland, Robert S. A1 - Virgilio, Massimiliano UR - http://www.europeanjournaloftaxonomy.eu/index.php/ejt/article/view/357 IS - 233 JO - EJT ER - TY - JOUR T1 - Patterns of neutral and adaptive genetic diversity across the natural range of sugar pine (Pinus lambertiana Dougl.) JF - Tree Genetics & Genomes Y1 - 2016 DO - 10.1007/s11295-016-0998-7 A1 - Vangestel, Carl A1 - Vázquez-Lobo, Alejandra A1 - Martínez-García, Pedro J. A1 - Calic, Irina A1 - Wegrzyn, Jill L. A1 - Neale, David B. VL - 12 UR - http://link.springer.com/10.1007/s11295-016-0998-7 IS - 3 JO - Tree Genetics & Genomes ER - TY - JOUR T1 - A longitudinal genetic survey identifies temporal shifts in the population structure of Dutch house sparrows JF - Heredity Y1 - 2016 DO - 10.1038/hdy.2016.38 A1 - Cousseau, L A1 - Husemann, M A1 - Foppen, R A1 - Vangestel, C A1 - Lens, L SP - 259 EP - 267 VL - 117 UR - http://www.nature.com/doifinder/10.1038/hdy.2016.38 IS - 4 JO - Heredity ER - TY - JOUR T1 - Leapfrogging into new territory: How Mascarene ridged frogs diversified across Africa and Madagascar to maintain their ecological niche JF - Molecular Phylogenetics and Evolution Y1 - 2016 DO - 10.1016/j.ympev.2016.09.018 A1 - Zimkus, Breda M. A1 - Lawson, Lucinda P. A1 - Barej, Michael A1 - Barratt, Christopher D. A1 - Channing, Alan A1 - Dash, Katrina M. A1 - Maximilian Dehling, J. A1 - Du Preez, Louis A1 - Gehring, Philip-Sebastian A1 - Greenbaum, Eli A1 - Gvoždík, Václav A1 - Harvey, James A1 - Kielgast, Jos A1 - Kusamba, Chifundera A1 - Nagy, Zoltán T. A1 - Pabijan, Maciej A1 - Penner, Johannes A1 - Rödel, Mark-Oliver A1 - Vences, Miguel A1 - Lötters, Stefan UR - http://linkinghub.elsevier.com/retrieve/pii/S1055790316302433 JO - Molecular Phylogenetics and Evolution ER - TY - JOUR T1 - Re-identification of an exotic bee introduced to the Hunter Valley region, New South Wales – Seladonia hotoni (vachal, 1903) (hymenoptera: halictidae) JF - Australian Entomologist Y1 - 2016 A1 - Batley, Michael A1 - Pauly, A. A1 - Gollan, John R. A1 - Ashcroft, Michael B. A1 - Sonet, Gontran SP - 109 EP - 112 VL - 43 IS - 3 ER - TY - JOUR T1 - Genome-wide single nucleotide polymorphism (SNP) identification and characterization in a non-model organism, the African buffalo (Syncerus caffer), using next generation sequencing JF - Mammalian Biology - Zeitschrift für Säugetierkunde Y1 - 2016 DO - http://dx.doi.org/10.1016/j.mambio.2016.07.047 A1 - Nathalie Smitz A1 - Pim Van Hooft A1 - Rasmus Heller A1 - Daniel Cornélis A1 - Philippe Chardonnet A1 - Robert Kraus A1 - Ben Greyling A1 - Richard Crooijmans A1 - Martien Groenen A1 - Johan Michaux SP - 595 EP - 603 KW - Molecular markers AB -

Abstract This study aimed to develop a set of \{SNP\} markers with high resolution and accuracy within the African buffalo. Such a set can be used, among others, to depict subtle population genetic structure for a better understanding of buffalo population dynamics. In total, 18.5 million \{DNA\} sequences of 76 bp were generated by next generation sequencing on an Illumina Genome Analyzer İI\} from a reduced representation library using \{DNA\} from a panel of 13 African buffalo representative of the four subspecies. We identified 2534 \{SNPs\} with high confidence within the panel by aligning the short sequences to the cattle genome (Bos taurus). The average sequencing depth of the complete aligned set of reads was estimated at 5x, and at 13x when only considering the final set of putative \{SNPs\} that passed the filtering criterion. Our set of \{SNPs\} was validated by \{PCR\} amplification and Sanger sequencing of 15 SNPs. Of these 15 SNPs, 14 amplified successfully and 13 were shown to be polymorphic (success rate: 87%). The fidelity of the identified set of \{SNPs\} and potential future applications are finally discussed.

VL - 81 UR - http://www.sciencedirect.com/science/article/pii/S1616504716300982 ER - TY - JOUR T1 - Testing the potential of DNA barcoding in vertebrate radiations: the case of the littoral cichlids (Pisces, Perciformes, Cichlidae) from Lake Tanganyika JF - Molecular Ecology Resources Y1 - 2016 DO - 10.1111/1755-0998.12523 A1 - Breman, Floris C. A1 - Loix, Sara A1 - Jordaens, Kurt A1 - Snoeks, Jos A1 - Van Steenberge, Maarten SP - n/a EP - n/a UR - http://doi.wiley.com/10.1111/1755-0998.12523 JO - Mol Ecol Resour ER - TY - JOUR T1 - Patterns of species richness, endemism and environmental gradients of African reptiles JF - Journal of Biogeography Y1 - 2016 DO - 10.1111/jbi.12848 A1 - Lewin, Amir A1 - Feldman, Anat A1 - Bauer, Aaron M. A1 - Belmaker, Jonathan A1 - Broadley, Donald G. A1 - Chirio, Laurent A1 - Itescu, Yuval A1 - LeBreton, Matthew A1 - Maza, Erez A1 - Meirte, Danny A1 - Nagy, Zoltán T. A1 - Novosolov, Maria A1 - Roll, Uri A1 - Tallowin, Oliver A1 - Trape, Jean-François A1 - Vidan, Enav A1 - Meiri, Shai SP - n/a–n/a KW - climatic variables KW - cross-taxon congruence KW - ecoregions KW - endemism KW - lizards KW - range-size quartiles KW - reptiles KW - snakes KW - species richness UR - http://dx.doi.org/10.1111/jbi.12848 ER - TY - JOUR T1 - Species limits, interspecific hybridization and phylogeny in the cryptic land snail complex Pyramidula: The power of RADseq data JF - Molecular Phylogenetics and Evolution Y1 - 2016 DO - 10.1016/j.ympev.2016.05.002 A1 - Razkin, Oihana A1 - Sonet, Gontran A1 - Breugelmans, Karin A1 - Madeira, María José A1 - Gómez-Moliner, Benjamín Juan A1 - Backeljau, Thierry SP - 267 EP - 278 VL - 101 UR - http://linkinghub.elsevier.com/retrieve/pii/S1055790316300835 JO - Molecular Phylogenetics and Evolution ER - TY - JOUR T1 - Molecular phylogeny of Panaspis and Afroablepharus skinks (Squamata: Scincidae) in the savannas of sub-Saharan Africa JF - Molecular Phylogenetics and Evolution Y1 - 2016 DO - 10.1016/j.ympev.2016.04.026 A1 - Medina, Maria F. A1 - Bauer, Aaron M. A1 - Branch, William R. A1 - Schmitz, Andreas A1 - Conradie, Werner A1 - Nagy, Zoltán T. A1 - Hibbitts, Toby J. A1 - Ernst, Raffael A1 - Portik, Daniel M. A1 - Nielsen, Stuart V. A1 - Colston, Timothy J. A1 - Kusamba, Chifundera A1 - Behangana, Mathias A1 - Rödel, Mark-Oliver A1 - Greenbaum, Eli SP - 409 EP - 423 VL - 100 UR - http://linkinghub.elsevier.com/retrieve/pii/S1055790316300604 JO - Molecular Phylogenetics and Evolution ER - TY - JOUR T1 - Looking beneath the tip of the iceberg: diversification of the genus Epimeria on the Antarctic shelf (Crustacea, Amphipoda) JF - Polar Biology Y1 - 2016 DO - 10.1007/s00300-016-1910-5 A1 - Verheye, Marie L. A1 - Backeljau, Thierry A1 - d’Udekem d’Acoz, Cédric UR - http://link.springer.com/10.1007/s00300-016-1910-5 JO - Polar Biol ER - TY - JOUR T1 - Comparative phylogeographies of six species of hinged terrapins (Pelusios spp.) reveal discordant patterns and unexpected differentiation in the P. castaneus/P. chapini complex and P. rhodesianus JF - Biological Journal of the Linnean Society Y1 - 2016 DO - 10.1111/bij.12647 A1 - Kindler, Carolin A1 - Moosig, Maggie A1 - Branch, William R. A1 - Harvey, James A1 - Kehlmaier, Christian A1 - Nagy, Zoltán T. A1 - Prokop, Hynek A1 - Široký, Pavel A1 - Fritz, Uwe SP - 305 EP - 321 VL - 117 UR - http://onlinelibrary.wiley.com/doi/10.1111/bij.12647/abstract IS - 2 JO - Biol. J. Linn. Soc. ER - TY - JOUR T1 - Towards a revision of the Neotropical soldierless termites (Isoptera: Termitidae): redescription of the genus Grigiotermes  Mathews and description of five new genera JF - Zoological Journal of the Linnean Society Y1 - 2016 DO - 10.1111/zoj.2016.176.issue-110.1111/zoj.12305 A1 - Bourguignon, Thomas A1 - Scheffrahn, Rudolf H. A1 - Nagy, Zoltán Tamás A1 - Sonet, Gontran A1 - Host, Benoît A1 - Roisin, Yves SP - 15 EP - 35 VL - 176 UR - http://doi.wiley.com/10.1111/zoj.2016.176.issue-1 IS - 1 JO - Zool J Linn Soc ER -